Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx6Q6P8X1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx6Q6P8X1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.03■□□□□ 0.96
Snx6Q6P8X1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx6Q6P8X1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx6Q6P8X1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx6Q6P8X1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx6Q6P8X1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Snx6Q6P8X1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
Snx6Q6P8X1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx6Q6P8X1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.02■□□□□ 0.96
Snx6Q6P8X1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx6Q6P8X1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Snx6Q6P8X1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.01■□□□□ 0.95
Snx6Q6P8X1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snx6Q6P8X1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snx6Q6P8X1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Snx6Q6P8X1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Snx6Q6P8X1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Snx6Q6P8X1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snx6Q6P8X1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snx6Q6P8X1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Snx6Q6P8X1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snx6Q6P8X1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21■□□□□ 0.95
Snx6Q6P8X1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx6Q6P8X1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx6Q6P8X1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx6Q6P8X1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Snx6Q6P8X1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Snx6Q6P8X1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.99■□□□□ 0.95
Snx6Q6P8X1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Snx6Q6P8X1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Snx6Q6P8X1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.98■□□□□ 0.95
Snx6Q6P8X1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snx6Q6P8X1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Snx6Q6P8X1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.97■□□□□ 0.95
Snx6Q6P8X1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx6Q6P8X1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx6Q6P8X1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx6Q6P8X1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Snx6Q6P8X1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Snx6Q6P8X1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Snx6Q6P8X1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.96■□□□□ 0.95
Snx6Q6P8X1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.96■□□□□ 0.95
Snx6Q6P8X1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx6Q6P8X1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Snx6Q6P8X1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx6Q6P8X1 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.95■□□□□ 0.94
Snx6Q6P8X1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Snx6Q6P8X1 Gm9806-201ENSMUST00000051080 552 ntBASIC20.95■□□□□ 0.94
Snx6Q6P8X1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Snx6Q6P8X1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx6Q6P8X1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snx6Q6P8X1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snx6Q6P8X1 Scarna2-201ENSMUST00000157560 414 ntBASIC20.94■□□□□ 0.94
Snx6Q6P8X1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Snx6Q6P8X1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snx6Q6P8X1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Snx6Q6P8X1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Snx6Q6P8X1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Snx6Q6P8X1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Snx6Q6P8X1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Snx6Q6P8X1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Snx6Q6P8X1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Snx6Q6P8X1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.92■□□□□ 0.94
Snx6Q6P8X1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Snx6Q6P8X1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Snx6Q6P8X1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Snx6Q6P8X1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Snx6Q6P8X1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Snx6Q6P8X1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Snx6Q6P8X1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Snx6Q6P8X1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Snx6Q6P8X1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx6Q6P8X1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Gm16437-201ENSMUST00000025669 507 ntBASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx6Q6P8X1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Snx6Q6P8X1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Snx6Q6P8X1 Gm11687-201ENSMUST00000118911 886 ntBASIC20.89■□□□□ 0.93
Snx6Q6P8X1 Gm44428-201ENSMUST00000204474 874 ntBASIC20.89■□□□□ 0.93
Snx6Q6P8X1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Snx6Q6P8X1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx6Q6P8X1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Snx6Q6P8X1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Snx6Q6P8X1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx6Q6P8X1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx6Q6P8X1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.88■□□□□ 0.93
Snx6Q6P8X1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx6Q6P8X1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Snx6Q6P8X1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx6Q6P8X1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms