Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Col11a2Q64739 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Col11a2Q64739 Gm21956-201ENSMUST00000179946 522 ntBASIC27.88■■■□□ 2.05
Col11a2Q64739 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Col11a2Q64739 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Col11a2Q64739 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.87■■■□□ 2.05
Col11a2Q64739 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Col11a2Q64739 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Col11a2Q64739 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC27.86■■■□□ 2.05
Col11a2Q64739 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Col11a2Q64739 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Col11a2Q64739 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC27.85■■■□□ 2.05
Col11a2Q64739 Amer2-203ENSMUST00000225247 2662 ntBASIC27.84■■■□□ 2.05
Col11a2Q64739 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Col11a2Q64739 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Col11a2Q64739 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC27.82■■■□□ 2.04
Col11a2Q64739 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Col11a2Q64739 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC27.81■■■□□ 2.04
Col11a2Q64739 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col11a2Q64739 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Col11a2Q64739 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col11a2Q64739 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC27.8■■■□□ 2.04
Col11a2Q64739 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Col11a2Q64739 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Col11a2Q64739 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Col11a2Q64739 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Col11a2Q64739 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Col11a2Q64739 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Col11a2Q64739 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC27.78■■■□□ 2.04
Col11a2Q64739 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC27.78■■■□□ 2.04
Col11a2Q64739 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Col11a2Q64739 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.77■■■□□ 2.04
Col11a2Q64739 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.77■■■□□ 2.04
Col11a2Q64739 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Col11a2Q64739 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.04
Col11a2Q64739 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC27.75■■■□□ 2.03
Col11a2Q64739 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Col11a2Q64739 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col11a2Q64739 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col11a2Q64739 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Col11a2Q64739 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col11a2Q64739 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Col11a2Q64739 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col11a2Q64739 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Col11a2Q64739 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC27.74■■■□□ 2.03
Col11a2Q64739 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Col11a2Q64739 Serp2-204ENSMUST00000228055 705 ntBASIC27.74■■■□□ 2.03
Col11a2Q64739 Gm13241-201ENSMUST00000094493 780 ntBASIC27.73■■■□□ 2.03
Col11a2Q64739 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Col11a2Q64739 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col11a2Q64739 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC27.72■■■□□ 2.03
Col11a2Q64739 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Col11a2Q64739 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col11a2Q64739 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Col11a2Q64739 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Col11a2Q64739 Gm7199-201ENSMUST00000118327 1485 ntBASIC27.7■■■□□ 2.03
Col11a2Q64739 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC27.7■■■□□ 2.03
Col11a2Q64739 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Col11a2Q64739 Gm16464-201ENSMUST00000117815 1095 ntBASIC27.7■■■□□ 2.02
Col11a2Q64739 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC27.7■■■□□ 2.02
Col11a2Q64739 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC27.69■■■□□ 2.02
Col11a2Q64739 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC27.68■■■□□ 2.02
Col11a2Q64739 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Col11a2Q64739 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
Col11a2Q64739 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Col11a2Q64739 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Col11a2Q64739 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Col11a2Q64739 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC27.67■■■□□ 2.02
Col11a2Q64739 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Col11a2Q64739 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Col11a2Q64739 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Col11a2Q64739 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Col11a2Q64739 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC27.66■■■□□ 2.02
Col11a2Q64739 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Col11a2Q64739 Gm22238-201ENSMUST00000175222 88 ntBASIC27.66■■■□□ 2.02
Col11a2Q64739 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Col11a2Q64739 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.66■■■□□ 2.02
Col11a2Q64739 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Col11a2Q64739 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Col11a2Q64739 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Col11a2Q64739 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Col11a2Q64739 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC27.64■■■□□ 2.02
Col11a2Q64739 AC164433.2-201ENSMUST00000226346 1701 ntBASIC27.64■■■□□ 2.02
Col11a2Q64739 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC27.64■■■□□ 2.02
Col11a2Q64739 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Col11a2Q64739 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
Col11a2Q64739 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
Col11a2Q64739 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
Col11a2Q64739 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Col11a2Q64739 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Col11a2Q64739 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.63■■■□□ 2.01
Col11a2Q64739 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col11a2Q64739 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
Col11a2Q64739 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC27.62■■■□□ 2.01
Col11a2Q64739 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Col11a2Q64739 Gm43034-201ENSMUST00000198678 1364 ntBASIC27.61■■■□□ 2.01
Col11a2Q64739 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.61■■■□□ 2.01
Col11a2Q64739 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col11a2Q64739 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Col11a2Q64739 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms