Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Atxn1P54254 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atxn1P54254 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.94■■□□□ 1.1
Atxn1P54254 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atxn1P54254 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atxn1P54254 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atxn1P54254 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Atxn1P54254 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Atxn1P54254 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Atxn1P54254 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Atxn1P54254 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atxn1P54254 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Atxn1P54254 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atxn1P54254 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Atxn1P54254 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.92■■□□□ 1.1
Atxn1P54254 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.92■■□□□ 1.1
Atxn1P54254 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atxn1P54254 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atxn1P54254 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atxn1P54254 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.91■■□□□ 1.1
Atxn1P54254 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Atxn1P54254 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atxn1P54254 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Atxn1P54254 Gm10232-201ENSMUST00000089221 720 ntBASIC21.9■■□□□ 1.1
Atxn1P54254 Gm13241-201ENSMUST00000094493 780 ntBASIC21.9■■□□□ 1.1
Atxn1P54254 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atxn1P54254 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.89■■□□□ 1.09
Atxn1P54254 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.89■■□□□ 1.09
Atxn1P54254 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Atxn1P54254 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Atxn1P54254 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atxn1P54254 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Atxn1P54254 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atxn1P54254 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
Atxn1P54254 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atxn1P54254 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atxn1P54254 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.87■■□□□ 1.09
Atxn1P54254 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Atxn1P54254 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.87■■□□□ 1.09
Atxn1P54254 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atxn1P54254 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atxn1P54254 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atxn1P54254 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atxn1P54254 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Atxn1P54254 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.86■■□□□ 1.09
Atxn1P54254 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atxn1P54254 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atxn1P54254 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Atxn1P54254 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.85■■□□□ 1.09
Atxn1P54254 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atxn1P54254 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Atxn1P54254 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atxn1P54254 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
Atxn1P54254 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Atxn1P54254 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Atxn1P54254 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.84■■□□□ 1.09
Atxn1P54254 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Atxn1P54254 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.83■■□□□ 1.09
Atxn1P54254 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.83■■□□□ 1.09
Atxn1P54254 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.83■■□□□ 1.09
Atxn1P54254 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.83■■□□□ 1.09
Atxn1P54254 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Atxn1P54254 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Atxn1P54254 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atxn1P54254 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atxn1P54254 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atxn1P54254 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Atxn1P54254 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atxn1P54254 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.82■■□□□ 1.08
Atxn1P54254 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atxn1P54254 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atxn1P54254 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Atxn1P54254 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atxn1P54254 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atxn1P54254 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atxn1P54254 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.81■■□□□ 1.08
Atxn1P54254 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atxn1P54254 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.8■■□□□ 1.08
Atxn1P54254 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atxn1P54254 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atxn1P54254 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atxn1P54254 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atxn1P54254 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.8■■□□□ 1.08
Atxn1P54254 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Atxn1P54254 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atxn1P54254 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atxn1P54254 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.79■■□□□ 1.08
Atxn1P54254 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Atxn1P54254 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn1P54254 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn1P54254 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.78■■□□□ 1.08
Atxn1P54254 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Atxn1P54254 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn1P54254 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn1P54254 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atxn1P54254 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atxn1P54254 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.77■■□□□ 1.08
Atxn1P54254 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Atxn1P54254 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Atxn1P54254 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms