Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rph3aP47708 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Rph3aP47708 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.2■□□□□ 0.98
Rph3aP47708 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rph3aP47708 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rph3aP47708 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
Rph3aP47708 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rph3aP47708 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rph3aP47708 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rph3aP47708 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rph3aP47708 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rph3aP47708 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.19■□□□□ 0.98
Rph3aP47708 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rph3aP47708 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rph3aP47708 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rph3aP47708 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rph3aP47708 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.19■□□□□ 0.98
Rph3aP47708 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rph3aP47708 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.18■□□□□ 0.98
Rph3aP47708 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.18■□□□□ 0.98
Rph3aP47708 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rph3aP47708 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rph3aP47708 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rph3aP47708 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rph3aP47708 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rph3aP47708 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.16■□□□□ 0.98
Rph3aP47708 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rph3aP47708 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rph3aP47708 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rph3aP47708 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Rph3aP47708 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Rph3aP47708 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rph3aP47708 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rph3aP47708 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Rph3aP47708 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rph3aP47708 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rph3aP47708 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rph3aP47708 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rph3aP47708 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rph3aP47708 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rph3aP47708 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rph3aP47708 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rph3aP47708 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rph3aP47708 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rph3aP47708 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rph3aP47708 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rph3aP47708 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.12■□□□□ 0.97
Rph3aP47708 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rph3aP47708 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.12■□□□□ 0.97
Rph3aP47708 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rph3aP47708 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rph3aP47708 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rph3aP47708 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Rph3aP47708 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rph3aP47708 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rph3aP47708 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rph3aP47708 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rph3aP47708 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rph3aP47708 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rph3aP47708 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.09■□□□□ 0.97
Rph3aP47708 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.09■□□□□ 0.97
Rph3aP47708 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rph3aP47708 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rph3aP47708 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rph3aP47708 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.08■□□□□ 0.97
Rph3aP47708 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Rph3aP47708 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rph3aP47708 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rph3aP47708 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rph3aP47708 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Rph3aP47708 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rph3aP47708 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Rph3aP47708 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rph3aP47708 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rph3aP47708 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rph3aP47708 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rph3aP47708 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rph3aP47708 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rph3aP47708 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.05■□□□□ 0.96
Rph3aP47708 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rph3aP47708 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.05■□□□□ 0.96
Rph3aP47708 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.05■□□□□ 0.96
Rph3aP47708 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rph3aP47708 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rph3aP47708 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Rph3aP47708 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rph3aP47708 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rph3aP47708 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rph3aP47708 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rph3aP47708 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.04■□□□□ 0.96
Rph3aP47708 Gm27502-201ENSMUST00000183495 199 ntBASIC21.04■□□□□ 0.96
Rph3aP47708 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rph3aP47708 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.04■□□□□ 0.96
Rph3aP47708 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rph3aP47708 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Rph3aP47708 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rph3aP47708 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rph3aP47708 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rph3aP47708 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rph3aP47708 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms