Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm9812-201ENSMUST00000061934 968 ntBASIC18.48■□□□□ 0.55
Trav12-1A0N8R1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav12-1A0N8R1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav12-1A0N8R1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav12-1A0N8R1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12-1A0N8R1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12-1A0N8R1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12-1A0N8R1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav12-1A0N8R1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.47■□□□□ 0.55
Trav12-1A0N8R1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12-1A0N8R1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12-1A0N8R1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12-1A0N8R1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav12-1A0N8R1 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.46■□□□□ 0.55
Trav12-1A0N8R1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12-1A0N8R1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trav12-1A0N8R1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.46■□□□□ 0.55
Trav12-1A0N8R1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12-1A0N8R1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav12-1A0N8R1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trav12-1A0N8R1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav12-1A0N8R1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav12-1A0N8R1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav12-1A0N8R1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav12-1A0N8R1 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.45■□□□□ 0.54
Trav12-1A0N8R1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trav12-1A0N8R1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav12-1A0N8R1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav12-1A0N8R1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav12-1A0N8R1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav12-1A0N8R1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.44■□□□□ 0.54
Trav12-1A0N8R1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav12-1A0N8R1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav12-1A0N8R1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav12-1A0N8R1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav12-1A0N8R1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav12-1A0N8R1 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.43■□□□□ 0.54
Trav12-1A0N8R1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav12-1A0N8R1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav12-1A0N8R1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav12-1A0N8R1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav12-1A0N8R1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.42■□□□□ 0.54
Trav12-1A0N8R1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav12-1A0N8R1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.42■□□□□ 0.54
Trav12-1A0N8R1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav12-1A0N8R1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav12-1A0N8R1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav12-1A0N8R1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12-1A0N8R1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12-1A0N8R1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav12-1A0N8R1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12-1A0N8R1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12-1A0N8R1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12-1A0N8R1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12-1A0N8R1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12-1A0N8R1 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.4■□□□□ 0.54
Trav12-1A0N8R1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav12-1A0N8R1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12-1A0N8R1 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.39■□□□□ 0.53
Trav12-1A0N8R1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav12-1A0N8R1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12-1A0N8R1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12-1A0N8R1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12-1A0N8R1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav12-1A0N8R1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav12-1A0N8R1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav12-1A0N8R1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trav12-1A0N8R1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav12-1A0N8R1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.38■□□□□ 0.53
Trav12-1A0N8R1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav12-1A0N8R1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav12-1A0N8R1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Trav12-1A0N8R1 Mir3960-201ENSMUST00000198213 73 ntBASIC18.37■□□□□ 0.53
Trav12-1A0N8R1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav12-1A0N8R1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav12-1A0N8R1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav12-1A0N8R1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav12-1A0N8R1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Gm22567-201ENSMUST00000175542 342 ntBASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trav12-1A0N8R1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12-1A0N8R1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12-1A0N8R1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.35■□□□□ 0.53
Trav12-1A0N8R1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12-1A0N8R1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12-1A0N8R1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12-1A0N8R1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav12-1A0N8R1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12-1A0N8R1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12-1A0N8R1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms