Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav13n-4A0A0G2JG01 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav13n-4A0A0G2JG01 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav13n-4A0A0G2JG01 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav13n-4A0A0G2JG01 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav13n-4A0A0G2JG01 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav13n-4A0A0G2JG01 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav13n-4A0A0G2JG01 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav13n-4A0A0G2JG01 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav13n-4A0A0G2JG01 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav13n-4A0A0G2JG01 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.79■□□□□ 0.44
Trav13n-4A0A0G2JG01 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13n-4A0A0G2JG01 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13n-4A0A0G2JG01 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13n-4A0A0G2JG01 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13n-4A0A0G2JG01 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13n-4A0A0G2JG01 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav13n-4A0A0G2JG01 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav13n-4A0A0G2JG01 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav13n-4A0A0G2JG01 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.76■□□□□ 0.43
Trav13n-4A0A0G2JG01 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13n-4A0A0G2JG01 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.76■□□□□ 0.43
Trav13n-4A0A0G2JG01 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Trav13n-4A0A0G2JG01 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13n-4A0A0G2JG01 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13n-4A0A0G2JG01 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13n-4A0A0G2JG01 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13n-4A0A0G2JG01 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13n-4A0A0G2JG01 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13n-4A0A0G2JG01 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav13n-4A0A0G2JG01 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav13n-4A0A0G2JG01 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.74■□□□□ 0.43
Trav13n-4A0A0G2JG01 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav13n-4A0A0G2JG01 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav13n-4A0A0G2JG01 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav13n-4A0A0G2JG01 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13n-4A0A0G2JG01 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13n-4A0A0G2JG01 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13n-4A0A0G2JG01 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav13n-4A0A0G2JG01 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13n-4A0A0G2JG01 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.73■□□□□ 0.43
Trav13n-4A0A0G2JG01 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13n-4A0A0G2JG01 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13n-4A0A0G2JG01 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13n-4A0A0G2JG01 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13n-4A0A0G2JG01 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav13n-4A0A0G2JG01 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13n-4A0A0G2JG01 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13n-4A0A0G2JG01 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13n-4A0A0G2JG01 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13n-4A0A0G2JG01 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13n-4A0A0G2JG01 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav13n-4A0A0G2JG01 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav13n-4A0A0G2JG01 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav13n-4A0A0G2JG01 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13n-4A0A0G2JG01 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav13n-4A0A0G2JG01 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-4A0A0G2JG01 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13n-4A0A0G2JG01 Gm14523-201ENSMUST00000117260 558 ntBASIC17.69■□□□□ 0.42
Trav13n-4A0A0G2JG01 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13n-4A0A0G2JG01 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13n-4A0A0G2JG01 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.69■□□□□ 0.42
Trav13n-4A0A0G2JG01 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav13n-4A0A0G2JG01 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.69■□□□□ 0.42
Trav13n-4A0A0G2JG01 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trav13n-4A0A0G2JG01 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav13n-4A0A0G2JG01 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.68■□□□□ 0.42
Trav13n-4A0A0G2JG01 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13n-4A0A0G2JG01 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13n-4A0A0G2JG01 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trav13n-4A0A0G2JG01 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13n-4A0A0G2JG01 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13n-4A0A0G2JG01 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13n-4A0A0G2JG01 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Trav13n-4A0A0G2JG01 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13n-4A0A0G2JG01 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13n-4A0A0G2JG01 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13n-4A0A0G2JG01 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13n-4A0A0G2JG01 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13n-4A0A0G2JG01 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13n-4A0A0G2JG01 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav13n-4A0A0G2JG01 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13n-4A0A0G2JG01 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav13n-4A0A0G2JG01 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13n-4A0A0G2JG01 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms