Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12d-3A0A075B6A4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12d-3A0A075B6A4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12d-3A0A075B6A4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12d-3A0A075B6A4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-3A0A075B6A4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.61■□□□□ 0.25
Trav12d-3A0A075B6A4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-3A0A075B6A4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Trav12d-3A0A075B6A4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-3A0A075B6A4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-3A0A075B6A4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-3A0A075B6A4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav12d-3A0A075B6A4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-3A0A075B6A4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-3A0A075B6A4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-3A0A075B6A4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-3A0A075B6A4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12d-3A0A075B6A4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12d-3A0A075B6A4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav12d-3A0A075B6A4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12d-3A0A075B6A4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12d-3A0A075B6A4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav12d-3A0A075B6A4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav12d-3A0A075B6A4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav12d-3A0A075B6A4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12d-3A0A075B6A4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12d-3A0A075B6A4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12d-3A0A075B6A4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12d-3A0A075B6A4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-3A0A075B6A4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-3A0A075B6A4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-3A0A075B6A4 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.56■□□□□ 0.24
Trav12d-3A0A075B6A4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav12d-3A0A075B6A4 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.56■□□□□ 0.24
Trav12d-3A0A075B6A4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12d-3A0A075B6A4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12d-3A0A075B6A4 Gm26115-201ENSMUST00000175605 87 ntBASIC16.56■□□□□ 0.24
Trav12d-3A0A075B6A4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.56■□□□□ 0.24
Trav12d-3A0A075B6A4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav12d-3A0A075B6A4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-3A0A075B6A4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-3A0A075B6A4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav12d-3A0A075B6A4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav12d-3A0A075B6A4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12d-3A0A075B6A4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav12d-3A0A075B6A4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12d-3A0A075B6A4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12d-3A0A075B6A4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav12d-3A0A075B6A4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12d-3A0A075B6A4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-3A0A075B6A4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-3A0A075B6A4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-3A0A075B6A4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Trav12d-3A0A075B6A4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-3A0A075B6A4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Trav12d-3A0A075B6A4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-3A0A075B6A4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav12d-3A0A075B6A4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav12d-3A0A075B6A4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12d-3A0A075B6A4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12d-3A0A075B6A4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.52■□□□□ 0.24
Trav12d-3A0A075B6A4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav12d-3A0A075B6A4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav12d-3A0A075B6A4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.52■□□□□ 0.23
Trav12d-3A0A075B6A4 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.52■□□□□ 0.23
Trav12d-3A0A075B6A4 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.52■□□□□ 0.23
Trav12d-3A0A075B6A4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav12d-3A0A075B6A4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-3A0A075B6A4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-3A0A075B6A4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-3A0A075B6A4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-3A0A075B6A4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-3A0A075B6A4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-3A0A075B6A4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav12d-3A0A075B6A4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-3A0A075B6A4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-3A0A075B6A4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-3A0A075B6A4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-3A0A075B6A4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav12d-3A0A075B6A4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-3A0A075B6A4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-3A0A075B6A4 Iqck-206ENSMUST00000208658 2891 ntBASIC16.48■□□□□ 0.23
Trav12d-3A0A075B6A4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-3A0A075B6A4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-3A0A075B6A4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav12d-3A0A075B6A4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav12d-3A0A075B6A4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav12d-3A0A075B6A4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12d-3A0A075B6A4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms