Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13-1A0A075B644 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13-1A0A075B644 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13-1A0A075B644 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13-1A0A075B644 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav13-1A0A075B644 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13-1A0A075B644 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13-1A0A075B644 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13-1A0A075B644 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13-1A0A075B644 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav13-1A0A075B644 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13-1A0A075B644 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13-1A0A075B644 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.6■□□□□ 0.09
Trav13-1A0A075B644 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13-1A0A075B644 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav13-1A0A075B644 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-1A0A075B644 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-1A0A075B644 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav13-1A0A075B644 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav13-1A0A075B644 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-1A0A075B644 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-1A0A075B644 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-1A0A075B644 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-1A0A075B644 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav13-1A0A075B644 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav13-1A0A075B644 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trav13-1A0A075B644 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13-1A0A075B644 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Trav13-1A0A075B644 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13-1A0A075B644 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13-1A0A075B644 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13-1A0A075B644 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13-1A0A075B644 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13-1A0A075B644 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13-1A0A075B644 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13-1A0A075B644 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13-1A0A075B644 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13-1A0A075B644 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13-1A0A075B644 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13-1A0A075B644 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13-1A0A075B644 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13-1A0A075B644 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13-1A0A075B644 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13-1A0A075B644 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13-1A0A075B644 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.56■□□□□ 0.08
Trav13-1A0A075B644 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav13-1A0A075B644 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13-1A0A075B644 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav13-1A0A075B644 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13-1A0A075B644 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav13-1A0A075B644 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13-1A0A075B644 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13-1A0A075B644 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13-1A0A075B644 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13-1A0A075B644 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13-1A0A075B644 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav13-1A0A075B644 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13-1A0A075B644 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav13-1A0A075B644 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13-1A0A075B644 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13-1A0A075B644 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13-1A0A075B644 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13-1A0A075B644 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13-1A0A075B644 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13-1A0A075B644 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13-1A0A075B644 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13-1A0A075B644 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13-1A0A075B644 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13-1A0A075B644 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13-1A0A075B644 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13-1A0A075B644 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav13-1A0A075B644 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav13-1A0A075B644 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13-1A0A075B644 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav13-1A0A075B644 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.51■□□□□ 0.07
Trav13-1A0A075B644 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav13-1A0A075B644 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.51■□□□□ 0.07
Trav13-1A0A075B644 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav13-1A0A075B644 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav13-1A0A075B644 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13-1A0A075B644 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13-1A0A075B644 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13-1A0A075B644 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav13-1A0A075B644 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13-1A0A075B644 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13-1A0A075B644 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13-1A0A075B644 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13-1A0A075B644 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-1A0A075B644 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 166.5 ms