Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 RPS2P28-201ENST00000314255 741 ntBASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 MTDHP3-201ENST00000594186 672 ntBASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 AP001269.4-201ENST00000609611 512 ntBASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA6Q9Y5G7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGA6Q9Y5G7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGA6Q9Y5G7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 KRT18P58-201ENST00000527480 1120 ntBASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 AC139887.3-201ENST00000568585 713 ntBASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 PP12613-201ENST00000424958 2230 ntBASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 BCL2-203ENST00000589955 5011 ntBASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA6Q9Y5G7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 AC106820.2-201ENST00000563775 3264 ntBASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 SLC25A1P1-201ENST00000528351 927 ntBASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 AC106730.1-201ENST00000566722 1090 ntBASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 MIR7706-201ENST00000613747 67 ntBASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 FAM215A-202ENST00000632077 792 ntBASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 LINC00602-201ENST00000629776 2065 ntBASIC16.88■□□□□ 0.29
PCDHGA6Q9Y5G7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms