Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
DENND2AQ9ULE3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 LINC00982-205ENST00000420957 435 ntBASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 AL353135.1-201ENST00000606729 504 ntBASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 LINC01451-201ENST00000623792 534 ntBASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 AC012317.2-201ENST00000623305 2251 ntBASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
DENND2AQ9ULE3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 GPR89P-201ENST00000407924 1495 ntBASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 AC007967.2-201ENST00000432613 625 ntBASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 RPS15P9-201ENST00000494093 319 ntBASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 RNA5SP416-201ENST00000516838 111 ntBASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 AC092865.5-201ENST00000545435 363 ntBASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 AC008667.4-201ENST00000607370 168 ntBASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.15■□□□□ 0.98
DENND2AQ9ULE3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.14■□□□□ 0.98
DENND2AQ9ULE3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DENND2AQ9ULE3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
DENND2AQ9ULE3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DENND2AQ9ULE3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
DENND2AQ9ULE3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
DENND2AQ9ULE3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 BX842568.4-201ENST00000421222 227 ntBASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 SLC25A6P5-201ENST00000435663 894 ntBASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 IGHV3-65-201ENST00000523210 341 ntBASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 AL805961.1-202ENST00000641562 540 ntBASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DENND2AQ9ULE3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms