Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HCFC1P51610 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC1P51610 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.21■□□□□ 0.02
HCFC1P51610 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC1P51610 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC1P51610 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC1P51610 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC1P51610 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC1P51610 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
HCFC1P51610 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC1P51610 COX5BP2-201ENST00000392354 334 ntBASIC15.21■□□□□ 0.02
HCFC1P51610 AC004461.1-201ENST00000412461 403 ntBASIC15.21■□□□□ 0.02
HCFC1P51610 FAM58CP-201ENST00000435741 640 ntBASIC15.21■□□□□ 0.02
HCFC1P51610 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.21■□□□□ 0.02
HCFC1P51610 AC023141.5-201ENST00000458585 616 ntBASIC15.21■□□□□ 0.02
HCFC1P51610 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC1P51610 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC1P51610 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.21■□□□□ 0.02
HCFC1P51610 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.21■□□□□ 0.02
HCFC1P51610 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.21■□□□□ 0.02
HCFC1P51610 AC109322.1-201ENST00000524499 1264 ntBASIC15.21■□□□□ 0.02
HCFC1P51610 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.21■□□□□ 0.02
HCFC1P51610 AC093028.1-201ENST00000622998 982 ntBASIC15.21■□□□□ 0.02
HCFC1P51610 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.21■□□□□ 0.02
HCFC1P51610 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC1P51610 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HCFC1P51610 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC1P51610 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC1P51610 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HCFC1P51610 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 AC097637.2-201ENST00000624096 1997 ntBASIC15.2■□□□□ 0.02
HCFC1P51610 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.2■□□□□ 0.02
HCFC1P51610 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC1P51610 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HCFC1P51610 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC1P51610 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.2■□□□□ 0.02
HCFC1P51610 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC1P51610 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC1P51610 AC005498.2-205ENST00000593218 784 ntBASIC15.2■□□□□ 0.02
HCFC1P51610 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC1P51610 AC106028.4-201ENST00000614509 607 ntBASIC15.2■□□□□ 0.02
HCFC1P51610 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC1P51610 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1P51610 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HCFC1P51610 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC1P51610 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC1P51610 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.2■□□□□ 0.02
HCFC1P51610 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC1P51610 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1P51610 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HCFC1P51610 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.19■□□□□ 0.02
HCFC1P51610 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HCFC1P51610 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1P51610 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.19■□□□□ 0.02
HCFC1P51610 OR7E47P-204ENST00000575924 449 ntBASIC15.19■□□□□ 0.02
HCFC1P51610 AC022145.2-201ENST00000598203 171 ntBASIC15.19■□□□□ 0.02
HCFC1P51610 AC091812.2-201ENST00000619081 385 ntBASIC15.19■□□□□ 0.02
HCFC1P51610 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HCFC1P51610 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HCFC1P51610 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HCFC1P51610 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1P51610 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1P51610 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1P51610 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC1P51610 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1P51610 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC1P51610 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 AC023141.13-201ENST00000604991 943 ntBASIC15.19■□□□□ 0.02
HCFC1P51610 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC1P51610 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms