Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 AC024563.2-201ENST00000603282 481 ntBASIC16.42■□□□□ 0.22
CLCA1A8K7I4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 AC092119.3-201ENST00000612618 583 ntBASIC16.42■□□□□ 0.22
CLCA1A8K7I4 NPAP1P7-201ENST00000613027 823 ntBASIC16.42■□□□□ 0.22
CLCA1A8K7I4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCA1A8K7I4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 Z83836.1-201ENST00000624605 1642 ntBASIC16.41■□□□□ 0.22
CLCA1A8K7I4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 AC133963.1-201ENST00000504166 1679 ntBASIC16.41■□□□□ 0.22
CLCA1A8K7I4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 MIR149-201ENST00000384879 89 ntBASIC16.41■□□□□ 0.22
CLCA1A8K7I4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 AC005332.3-201ENST00000589904 676 ntBASIC16.41■□□□□ 0.22
CLCA1A8K7I4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 SDHAP2-201ENST00000455183 2001 ntBASIC16.41■□□□□ 0.22
CLCA1A8K7I4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCA1A8K7I4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLCA1A8K7I4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms