Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Gm4995-201ENSMUST00000117247 432 ntBASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga4Q91XY4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Gm23935-201ENSMUST00000102303 57 ntBASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Gm24270-201ENSMUST00000102326 57 ntBASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Gm16198-201ENSMUST00000118766 670 ntBASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Rprl2-201ENSMUST00000157150 290 ntBASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Gm24245-201ENSMUST00000157318 57 ntBASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga4Q91XY4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Gm18737-201ENSMUST00000173594 937 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms