Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD6Q8TD26 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.59■□□□□ 0.09
CHD6Q8TD26 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD6Q8TD26 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD6Q8TD26 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.59■□□□□ 0.09
CHD6Q8TD26 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.59■□□□□ 0.09
CHD6Q8TD26 IGHV3-62-201ENST00000520057 340 ntBASIC15.59■□□□□ 0.09
CHD6Q8TD26 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CHD6Q8TD26 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.59■□□□□ 0.09
CHD6Q8TD26 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.59■□□□□ 0.09
CHD6Q8TD26 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD6Q8TD26 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHD6Q8TD26 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHD6Q8TD26 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHD6Q8TD26 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHD6Q8TD26 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHD6Q8TD26 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHD6Q8TD26 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHD6Q8TD26 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 AC005229.1-201ENST00000392885 409 ntBASIC15.58■□□□□ 0.08
CHD6Q8TD26 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.58■□□□□ 0.08
CHD6Q8TD26 AC006033.1-201ENST00000440505 426 ntBASIC15.58■□□□□ 0.08
CHD6Q8TD26 AC007551.1-201ENST00000457394 519 ntBASIC15.58■□□□□ 0.08
CHD6Q8TD26 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.58■□□□□ 0.08
CHD6Q8TD26 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.58■□□□□ 0.08
CHD6Q8TD26 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.58■□□□□ 0.08
CHD6Q8TD26 ACTG1P17-201ENST00000558391 1119 ntBASIC15.58■□□□□ 0.08
CHD6Q8TD26 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.58■□□□□ 0.08
CHD6Q8TD26 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 AC008267.7-201ENST00000624570 1194 ntBASIC15.58■□□□□ 0.08
CHD6Q8TD26 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CHD6Q8TD26 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.58■□□□□ 0.08
CHD6Q8TD26 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.58■□□□□ 0.08
CHD6Q8TD26 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD6Q8TD26 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.58■□□□□ 0.08
CHD6Q8TD26 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.58■□□□□ 0.08
CHD6Q8TD26 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.57■□□□□ 0.08
CHD6Q8TD26 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHD6Q8TD26 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.57■□□□□ 0.08
CHD6Q8TD26 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 AC004790.1-201ENST00000612686 536 ntBASIC15.56■□□□□ 0.08
CHD6Q8TD26 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD6Q8TD26 AL080243.2-201ENST00000418783 582 ntBASIC15.56■□□□□ 0.08
CHD6Q8TD26 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 RPL7P3-201ENST00000441388 714 ntBASIC15.56■□□□□ 0.08
CHD6Q8TD26 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CHD6Q8TD26 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms