Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
BEST3Q8N1M1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 AC068880.1-201ENST00000507289 2297 ntBASIC16.31■□□□□ 0.2
BEST3Q8N1M1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 RPS2P28-201ENST00000314255 741 ntBASIC16.31■□□□□ 0.2
BEST3Q8N1M1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 RPS2P1-201ENST00000434010 821 ntBASIC16.31■□□□□ 0.2
BEST3Q8N1M1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 SLC25A1P1-201ENST00000528351 927 ntBASIC16.31■□□□□ 0.2
BEST3Q8N1M1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 AC139887.3-201ENST00000568585 713 ntBASIC16.31■□□□□ 0.2
BEST3Q8N1M1 NKAPP1-205ENST00000585790 367 ntBASIC16.31■□□□□ 0.2
BEST3Q8N1M1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.31■□□□□ 0.2
BEST3Q8N1M1 AF228730.7-201ENST00000641842 219 ntBASIC16.31■□□□□ 0.2
BEST3Q8N1M1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 BICD1-207ENST00000551848 1962 ntBASIC16.31■□□□□ 0.2
BEST3Q8N1M1 AL354751.1-201ENST00000412768 1863 ntBASIC16.31■□□□□ 0.2
BEST3Q8N1M1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.31■□□□□ 0.2
BEST3Q8N1M1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 REXO1L9P-201ENST00000604264 2108 ntBASIC16.3■□□□□ 0.2
BEST3Q8N1M1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
BEST3Q8N1M1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.29■□□□□ 0.2
BEST3Q8N1M1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.29■□□□□ 0.2
BEST3Q8N1M1 OR7E14P-202ENST00000530490 1290 ntBASIC16.29■□□□□ 0.2
BEST3Q8N1M1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms