Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.78□□□□□ -0.2
Ripk1Q60855 Gm5364-201ENSMUST00000216789 889 ntBASIC13.78□□□□□ -0.2
Ripk1Q60855 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.78□□□□□ -0.2
Ripk1Q60855 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.78□□□□□ -0.2
Ripk1Q60855 Gm10154-201ENSMUST00000084445 354 ntBASIC13.78□□□□□ -0.2
Ripk1Q60855 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Ripk1Q60855 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Ripk1Q60855 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ripk1Q60855 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ripk1Q60855 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ripk1Q60855 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.78□□□□□ -0.2
Ripk1Q60855 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.78□□□□□ -0.2
Ripk1Q60855 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ripk1Q60855 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ripk1Q60855 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ripk1Q60855 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ripk1Q60855 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ripk1Q60855 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ripk1Q60855 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Ripk1Q60855 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Gm9727-201ENSMUST00000161387 555 ntBASIC13.77□□□□□ -0.21
Ripk1Q60855 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ripk1Q60855 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.77□□□□□ -0.21
Ripk1Q60855 Carlr-201ENSMUST00000181515 2574 ntBASIC13.77□□□□□ -0.21
Ripk1Q60855 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.77□□□□□ -0.21
Ripk1Q60855 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.77□□□□□ -0.21
Ripk1Q60855 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.77□□□□□ -0.21
Ripk1Q60855 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ripk1Q60855 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Ripk1Q60855 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.76□□□□□ -0.21
Ripk1Q60855 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Ripk1Q60855 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Ripk1Q60855 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Gm16026-204ENSMUST00000162652 683 ntBASIC13.76□□□□□ -0.21
Ripk1Q60855 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ripk1Q60855 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.76□□□□□ -0.21
Ripk1Q60855 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.76□□□□□ -0.21
Ripk1Q60855 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.76□□□□□ -0.21
Ripk1Q60855 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.76□□□□□ -0.21
Ripk1Q60855 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ripk1Q60855 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ripk1Q60855 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ripk1Q60855 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Ripk1Q60855 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ripk1Q60855 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ripk1Q60855 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ripk1Q60855 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ripk1Q60855 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ripk1Q60855 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ripk1Q60855 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ripk1Q60855 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ripk1Q60855 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ripk1Q60855 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ripk1Q60855 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms