Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 AC022898.2-201ENST00000616822 1312 ntBASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNAP47Q5SQN1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 KRT8P47-201ENST00000604727 1398 ntBASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNAP47Q5SQN1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SNAP47Q5SQN1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SNAP47Q5SQN1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNAP47Q5SQN1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SNAP47Q5SQN1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SNAP47Q5SQN1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.08■□□□□ 0.33
SNAP47Q5SQN1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNAP47Q5SQN1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNAP47Q5SQN1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 AC010460.3-201ENST00000511359 1579 ntBASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 RPL13AP23-201ENST00000480739 586 ntBASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 AC023511.2-201ENST00000618803 211 ntBASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 AC116407.3-201ENST00000623905 1129 ntBASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNAP47Q5SQN1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms