Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.83■□□□□ 0.6
CSPG5O95196 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.83■□□□□ 0.6
CSPG5O95196 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CSPG5O95196 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CSPG5O95196 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSPG5O95196 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CSPG5O95196 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CSPG5O95196 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CSPG5O95196 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSPG5O95196 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSPG5O95196 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.83■□□□□ 0.6
CSPG5O95196 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSPG5O95196 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.82■□□□□ 0.6
CSPG5O95196 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.82■□□□□ 0.6
CSPG5O95196 AC005332.8-201ENST00000622750 2735 ntBASIC18.82■□□□□ 0.6
CSPG5O95196 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CSPG5O95196 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CSPG5O95196 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CSPG5O95196 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.82■□□□□ 0.6
CSPG5O95196 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CSPG5O95196 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
CSPG5O95196 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
CSPG5O95196 AD001527.2-201ENST00000622994 785 ntBASIC18.82■□□□□ 0.6
CSPG5O95196 AC093028.1-201ENST00000622998 982 ntBASIC18.82■□□□□ 0.6
CSPG5O95196 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.82■□□□□ 0.6
CSPG5O95196 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CSPG5O95196 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.82■□□□□ 0.6
CSPG5O95196 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CSPG5O95196 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CSPG5O95196 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSPG5O95196 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.81■□□□□ 0.6
CSPG5O95196 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.81■□□□□ 0.6
CSPG5O95196 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.81■□□□□ 0.6
CSPG5O95196 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.81■□□□□ 0.6
CSPG5O95196 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.81■□□□□ 0.6
CSPG5O95196 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.81■□□□□ 0.6
CSPG5O95196 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.81■□□□□ 0.6
CSPG5O95196 MIR3197-201ENST00000582241 73 ntBASIC18.81■□□□□ 0.6
CSPG5O95196 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CSPG5O95196 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.81■□□□□ 0.6
CSPG5O95196 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.81■□□□□ 0.6
CSPG5O95196 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.81■□□□□ 0.6
CSPG5O95196 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.81■□□□□ 0.6
CSPG5O95196 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSPG5O95196 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CSPG5O95196 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.8■□□□□ 0.6
CSPG5O95196 VN2R19P-201ENST00000442399 1052 ntBASIC18.8■□□□□ 0.6
CSPG5O95196 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CSPG5O95196 AP002472.1-201ENST00000577490 586 ntBASIC18.8■□□□□ 0.6
CSPG5O95196 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CSPG5O95196 AC004706.3-202ENST00000621574 984 ntBASIC18.8■□□□□ 0.6
CSPG5O95196 AC073592.4-201ENST00000623827 446 ntBASIC18.8■□□□□ 0.6
CSPG5O95196 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.8■□□□□ 0.6
CSPG5O95196 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
CSPG5O95196 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.8■□□□□ 0.6
CSPG5O95196 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CSPG5O95196 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSPG5O95196 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms