Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 CTBP2P3-201ENST00000585629 1255 ntBASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AC007967.4-201ENST00000614700 386 ntBASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
COL25A1Q9BXS0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 SLC7A15P-201ENST00000424028 1363 ntBASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 AL590787.1-201ENST00000568856 1315 ntBASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 AL391422.3-201ENST00000603791 2761 ntBASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 KRT43P-201ENST00000434019 910 ntBASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 STK19B-204ENST00000512515 211 ntBASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
COL25A1Q9BXS0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 MYCLP2-201ENST00000449268 967 ntBASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 SLC25A6P2-201ENST00000497974 877 ntBASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 AC018445.3-201ENST00000624177 1945 ntBASIC17.55■□□□□ 0.4
COL25A1Q9BXS0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms