Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX11Q96FC9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX11Q96FC9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX11Q96FC9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
DDX11Q96FC9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX11Q96FC9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.89■□□□□ 0.94
DDX11Q96FC9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 AC139713.2-201ENST00000641328 2723 ntBASIC20.89■□□□□ 0.93
DDX11Q96FC9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 AL662844.1-201ENST00000546340 181 ntBASIC20.89■□□□□ 0.93
DDX11Q96FC9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 AC009949.1-201ENST00000623048 1830 ntBASIC20.89■□□□□ 0.93
DDX11Q96FC9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
DDX11Q96FC9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX11Q96FC9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX11Q96FC9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX11Q96FC9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX11Q96FC9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 AC020916.1-201ENST00000587762 1774 ntBASIC20.88■□□□□ 0.93
DDX11Q96FC9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX11Q96FC9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX11Q96FC9 POM121L3P-201ENST00000419331 1163 ntBASIC20.88■□□□□ 0.93
DDX11Q96FC9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX11Q96FC9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX11Q96FC9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX11Q96FC9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX11Q96FC9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX11Q96FC9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX11Q96FC9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX11Q96FC9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX11Q96FC9 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX11Q96FC9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.87■□□□□ 0.93
DDX11Q96FC9 SAPCD2P3-201ENST00000455031 850 ntBASIC20.87■□□□□ 0.93
DDX11Q96FC9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX11Q96FC9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX11Q96FC9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX11Q96FC9 SLC25A6P4-201ENST00000586535 553 ntBASIC20.87■□□□□ 0.93
DDX11Q96FC9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX11Q96FC9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
DDX11Q96FC9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
DDX11Q96FC9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX11Q96FC9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 KRT8P47-201ENST00000604727 1398 ntBASIC20.86■□□□□ 0.93
DDX11Q96FC9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX11Q96FC9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DDX11Q96FC9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms