Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATRIPQ8WXE1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.39■□□□□ 0.7
ATRIPQ8WXE1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.39■□□□□ 0.7
ATRIPQ8WXE1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
ATRIPQ8WXE1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
ATRIPQ8WXE1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ATRIPQ8WXE1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 AC018695.7-201ENST00000624587 2492 ntBASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 PVRIG2P-201ENST00000435460 978 ntBASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATRIPQ8WXE1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 KRT17P6-201ENST00000453795 1220 ntBASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 AC006538.3-201ENST00000612495 578 ntBASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATRIPQ8WXE1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 NEK4P2-201ENST00000580004 1012 ntBASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 NPAP1P7-201ENST00000613027 823 ntBASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 HYMAI.1-201ENST00000620949 238 ntBASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATRIPQ8WXE1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms