Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 INTS4P1-201ENST00000438455 1935 ntBASIC17.53■□□□□ 0.4
LDLRAP1Q5SW96 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.53■□□□□ 0.4
LDLRAP1Q5SW96 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 AC103564.2-201ENST00000432853 1299 ntBASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 MIR5100-201ENST00000579544 119 ntBASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDLRAP1Q5SW96 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LDLRAP1Q5SW96 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.52■□□□□ 0.39
LDLRAP1Q5SW96 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LDLRAP1Q5SW96 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.52■□□□□ 0.39
LDLRAP1Q5SW96 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
LDLRAP1Q5SW96 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LDLRAP1Q5SW96 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LDLRAP1Q5SW96 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.52■□□□□ 0.39
LDLRAP1Q5SW96 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.52■□□□□ 0.39
LDLRAP1Q5SW96 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.52■□□□□ 0.39
LDLRAP1Q5SW96 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 TSPY19P-201ENST00000418461 509 ntBASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 TSPY18P-201ENST00000441642 509 ntBASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 KRT18P31-201ENST00000506277 1292 ntBASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 AC091304.2-201ENST00000564639 760 ntBASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 LINC01711-201ENST00000598340 967 ntBASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 AL591684.3-201ENST00000605187 298 ntBASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 AC012313.10-201ENST00000623509 926 ntBASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
LDLRAP1Q5SW96 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.5■□□□□ 0.39
LDLRAP1Q5SW96 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms