Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PDE6BP35913 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PDE6BP35913 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.51■■□□□ 1.03
PDE6BP35913 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PDE6BP35913 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.51■■□□□ 1.03
PDE6BP35913 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.51■■□□□ 1.03
PDE6BP35913 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PDE6BP35913 CNN2P2-201ENST00000443536 909 ntBASIC21.51■■□□□ 1.03
PDE6BP35913 CNN2P3-201ENST00000450201 906 ntBASIC21.51■■□□□ 1.03
PDE6BP35913 SPDYE11-202ENST00000450699 704 ntBASIC21.51■■□□□ 1.03
PDE6BP35913 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 INGX-202ENST00000489074 768 ntBASIC21.51■■□□□ 1.03
PDE6BP35913 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.51■■□□□ 1.03
PDE6BP35913 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.51■■□□□ 1.03
PDE6BP35913 SPDYE9P-201ENST00000570642 692 ntBASIC21.51■■□□□ 1.03
PDE6BP35913 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.51■■□□□ 1.03
PDE6BP35913 SPDYE10P-202ENST00000612005 668 ntBASIC21.51■■□□□ 1.03
PDE6BP35913 SPDYE8P-202ENST00000612377 668 ntBASIC21.51■■□□□ 1.03
PDE6BP35913 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.51■■□□□ 1.03
PDE6BP35913 AL136317.3-201ENST00000618497 906 ntBASIC21.51■■□□□ 1.03
PDE6BP35913 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PDE6BP35913 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.51■■□□□ 1.03
PDE6BP35913 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE6BP35913 AC129492.6-201ENST00000611383 1305 ntBASIC21.51■■□□□ 1.03
PDE6BP35913 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE6BP35913 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE6BP35913 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE6BP35913 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.51■■□□□ 1.03
PDE6BP35913 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PDE6BP35913 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE6BP35913 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDE6BP35913 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE6BP35913 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDE6BP35913 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.5■■□□□ 1.03
PDE6BP35913 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE6BP35913 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
PDE6BP35913 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PDE6BP35913 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE6BP35913 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.5■■□□□ 1.03
PDE6BP35913 KRT8P48-201ENST00000515599 1220 ntBASIC21.5■■□□□ 1.03
PDE6BP35913 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.5■■□□□ 1.03
PDE6BP35913 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.5■■□□□ 1.03
PDE6BP35913 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.5■■□□□ 1.03
PDE6BP35913 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE6BP35913 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PDE6BP35913 AF228730.6-201ENST00000641497 218 ntBASIC21.5■■□□□ 1.03
PDE6BP35913 AC084121.3-201ENST00000641716 218 ntBASIC21.5■■□□□ 1.03
PDE6BP35913 AC105233.6-201ENST00000642093 218 ntBASIC21.5■■□□□ 1.03
PDE6BP35913 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE6BP35913 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDE6BP35913 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDE6BP35913 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.49■■□□□ 1.03
PDE6BP35913 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.49■■□□□ 1.03
PDE6BP35913 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PDE6BP35913 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.49■■□□□ 1.03
PDE6BP35913 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.49■■□□□ 1.03
PDE6BP35913 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PDE6BP35913 AC099522.2-201ENST00000607001 744 ntBASIC21.49■■□□□ 1.03
PDE6BP35913 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PDE6BP35913 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE6BP35913 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.48■■□□□ 1.03
PDE6BP35913 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.48■■□□□ 1.03
PDE6BP35913 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.48■■□□□ 1.03
PDE6BP35913 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PDE6BP35913 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.48■■□□□ 1.03
PDE6BP35913 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 AC140658.5-201ENST00000438532 169 ntBASIC21.48■■□□□ 1.03
PDE6BP35913 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.48■■□□□ 1.03
PDE6BP35913 AC069335.1-201ENST00000489972 472 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms