Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 AL160237.2-201ENST00000556165 472 ntBASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 SIRPAP1-201ENST00000448467 1770 ntBASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 AL138688.1-201ENST00000624851 1594 ntBASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 AKR1C7P-201ENST00000305623 895 ntBASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 POM121L3P-201ENST00000419331 1163 ntBASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPDC1A2A3K4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 AC005336.2-201ENST00000593183 939 ntBASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 AL121912.1-201ENST00000603683 238 ntBASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 LINC01451-201ENST00000623792 534 ntBASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPDC1A2A3K4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 SAPCD2P3-201ENST00000455031 850 ntBASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 AL591684.3-201ENST00000605187 298 ntBASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 REXO1L6P-202ENST00000619970 1078 ntBASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms