Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 AP002414.1-201ENST00000391405 1147 ntBASIC16.65■□□□□ 0.26
LHX6Q9UPM6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 BASP1P1-201ENST00000430708 665 ntBASIC16.65■□□□□ 0.26
LHX6Q9UPM6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 VN2R19P-201ENST00000442399 1052 ntBASIC16.65■□□□□ 0.26
LHX6Q9UPM6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 BX005266.1-201ENST00000473402 457 ntBASIC16.65■□□□□ 0.26
LHX6Q9UPM6 AC068472.1-201ENST00000474589 881 ntBASIC16.65■□□□□ 0.26
LHX6Q9UPM6 AC067863.1-201ENST00000494933 530 ntBASIC16.65■□□□□ 0.26
LHX6Q9UPM6 AP005018.1-201ENST00000525475 301 ntBASIC16.65■□□□□ 0.26
LHX6Q9UPM6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 AL513210.1-201ENST00000629608 234 ntBASIC16.65■□□□□ 0.26
LHX6Q9UPM6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 AC120498.9-201ENST00000339021 3867 ntBASIC16.65■□□□□ 0.26
LHX6Q9UPM6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX6Q9UPM6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LHX6Q9UPM6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LHX6Q9UPM6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 DUX4L27-201ENST00000554796 1261 ntBASIC16.64■□□□□ 0.25
LHX6Q9UPM6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 AC105148.1-201ENST00000604961 409 ntBASIC16.64■□□□□ 0.25
LHX6Q9UPM6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 AL358472.5-202ENST00000641448 1267 ntBASIC16.64■□□□□ 0.25
LHX6Q9UPM6 AL022326.1-202ENST00000641533 845 ntBASIC16.64■□□□□ 0.25
LHX6Q9UPM6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 MTMR9LP-203ENST00000426597 1545 ntBASIC16.64■□□□□ 0.25
LHX6Q9UPM6 AL163051.1-201ENST00000569214 1512 ntBASIC16.64■□□□□ 0.25
LHX6Q9UPM6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX6Q9UPM6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 AC005332.7-201ENST00000614046 2005 ntBASIC16.63■□□□□ 0.25
LHX6Q9UPM6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 AC125634.1-201ENST00000438758 1403 ntBASIC16.63■□□□□ 0.25
LHX6Q9UPM6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX6Q9UPM6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms