Protein–RNA interactions for Protein: Q9NRF2

SH2B1, SH2B adapter protein 1, humanhuman

Predicted RBP Predictions only

Length 756 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1Q9NRF2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2B1Q9NRF2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 MYCLP1-201ENST00000372451 1075 ntBASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 GUSBP12-201ENST00000513727 720 ntBASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2B1Q9NRF2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.64■□□□□ 0.9
SH2B1Q9NRF2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH2B1Q9NRF2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
SH2B1Q9NRF2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SH2B1Q9NRF2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH2B1Q9NRF2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.9
SH2B1Q9NRF2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 AL353801.3-201ENST00000609898 542 ntBASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.64■□□□□ 0.89
SH2B1Q9NRF2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 NKILA-202ENST00000614771 2598 ntBASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 AC007967.3-201ENST00000434308 558 ntBASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 AL671277.2-201ENST00000458060 996 ntBASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 RN7SL606P-201ENST00000472779 293 ntBASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 AC022616.7-201ENST00000525383 220 ntBASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH2B1Q9NRF2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms