Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 AC138932.1-201ENST00000534164 6830 ntBASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 AC026396.1-201ENST00000419388 421 ntBASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RFWD3Q6PCD5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 FAAHP1-202ENST00000446499 1238 ntBASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 AF238378.1-201ENST00000526806 358 ntBASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 AC084018.2-201ENST00000613093 2607 ntBASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RFWD3Q6PCD5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 AC138028.4-201ENST00000564984 1845 ntBASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 AC097374.2-201ENST00000618617 1306 ntBASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 AC096633.1-201ENST00000422446 749 ntBASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 SAPCD2P3-201ENST00000455031 850 ntBASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD3Q6PCD5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms