Protein–RNA interactions for Protein: Q6P1M0

SLC27A4, Long-chain fatty acid transport protein 4, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A4Q6P1M0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC27A4Q6P1M0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC27A4Q6P1M0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC27A4Q6P1M0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC27A4Q6P1M0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 CYP2D8P-201ENST00000433633 1490 ntBASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 INGX-201ENST00000359239 846 ntBASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 AC211429.1-201ENST00000415277 523 ntBASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 AC145285.6-201ENST00000604632 637 ntBASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 LINC01023-201ENST00000606054 436 ntBASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 AC133561.5-201ENST00000635547 218 ntBASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 AL356309.3-201ENST00000624132 1934 ntBASIC16.04■□□□□ 0.16
SLC27A4Q6P1M0 KRT89P-201ENST00000620027 1478 ntBASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 AC106886.4-201ENST00000623557 2502 ntBASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 BX276092.7-203ENST00000637198 1536 ntBASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC27A4Q6P1M0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC27A4Q6P1M0 KRT8P9-201ENST00000558927 1449 ntBASIC16.02■□□□□ 0.16
SLC27A4Q6P1M0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC27A4Q6P1M0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC27A4Q6P1M0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC27A4Q6P1M0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
SLC27A4Q6P1M0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC27A4Q6P1M0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms