Protein–RNA interactions for Protein: P10404

MLV-related proviral Env polyprotein, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P10404 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P10404 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
P10404 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P10404 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P10404 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.52□□□□□ -0.4
P10404 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P10404 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
P10404 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.52□□□□□ -0.4
P10404 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
P10404 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
P10404 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P10404 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.52□□□□□ -0.41
P10404 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
P10404 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.52□□□□□ -0.41
P10404 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
P10404 Gm14140-201ENSMUST00000119999 995 ntBASIC12.52□□□□□ -0.41
P10404 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.52□□□□□ -0.41
P10404 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.52□□□□□ -0.41
P10404 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P10404 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.52□□□□□ -0.41
P10404 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P10404 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.52□□□□□ -0.41
P10404 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P10404 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P10404 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P10404 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P10404 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P10404 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P10404 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P10404 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
P10404 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P10404 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
P10404 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
P10404 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.51□□□□□ -0.41
P10404 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.51□□□□□ -0.41
P10404 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.51□□□□□ -0.41
P10404 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.51□□□□□ -0.41
P10404 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.51□□□□□ -0.41
P10404 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P10404 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
P10404 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P10404 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
P10404 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
P10404 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.5□□□□□ -0.41
P10404 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.5□□□□□ -0.41
P10404 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P10404 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.5□□□□□ -0.41
P10404 Gm6443-201ENSMUST00000203599 874 ntBASIC12.5□□□□□ -0.41
P10404 Gm18246-201ENSMUST00000221023 728 ntBASIC12.5□□□□□ -0.41
P10404 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
P10404 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms