Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.95■□□□□ 0.3
GFRA3O60609 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.95■□□□□ 0.3
GFRA3O60609 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.95■□□□□ 0.3
GFRA3O60609 AC234783.1-201ENST00000441761 496 ntBASIC16.95■□□□□ 0.3
GFRA3O60609 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
GFRA3O60609 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.95■□□□□ 0.3
GFRA3O60609 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.95■□□□□ 0.3
GFRA3O60609 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.95■□□□□ 0.3
GFRA3O60609 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.95■□□□□ 0.3
GFRA3O60609 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.95■□□□□ 0.3
GFRA3O60609 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.95■□□□□ 0.3
GFRA3O60609 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 AL645728.2-201ENST00000641974 660 ntBASIC16.95■□□□□ 0.3
GFRA3O60609 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.95■□□□□ 0.3
GFRA3O60609 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.95■□□□□ 0.3
GFRA3O60609 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
GFRA3O60609 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA3O60609 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
GFRA3O60609 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GFRA3O60609 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.94■□□□□ 0.3
GFRA3O60609 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA3O60609 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GFRA3O60609 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.94■□□□□ 0.3
GFRA3O60609 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.94■□□□□ 0.3
GFRA3O60609 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GFRA3O60609 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA3O60609 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA3O60609 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.94■□□□□ 0.3
GFRA3O60609 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.94■□□□□ 0.3
GFRA3O60609 ACTBP11-201ENST00000436287 1126 ntBASIC16.94■□□□□ 0.3
GFRA3O60609 STK19B-204ENST00000512515 211 ntBASIC16.94■□□□□ 0.3
GFRA3O60609 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.94■□□□□ 0.3
GFRA3O60609 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.94■□□□□ 0.3
GFRA3O60609 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.94■□□□□ 0.3
GFRA3O60609 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.94■□□□□ 0.3
GFRA3O60609 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.94■□□□□ 0.3
GFRA3O60609 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.94■□□□□ 0.3
GFRA3O60609 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA3O60609 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA3O60609 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA3O60609 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA3O60609 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.94■□□□□ 0.3
GFRA3O60609 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GFRA3O60609 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GFRA3O60609 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GFRA3O60609 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.94■□□□□ 0.3
GFRA3O60609 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.93■□□□□ 0.3
GFRA3O60609 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
GFRA3O60609 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GFRA3O60609 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.93■□□□□ 0.3
GFRA3O60609 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.93■□□□□ 0.3
GFRA3O60609 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GFRA3O60609 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
GFRA3O60609 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
GFRA3O60609 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.93■□□□□ 0.3
GFRA3O60609 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.93■□□□□ 0.3
GFRA3O60609 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.93■□□□□ 0.3
GFRA3O60609 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.93■□□□□ 0.3
GFRA3O60609 MIR6727-201ENST00000620702 65 ntBASIC16.93■□□□□ 0.3
GFRA3O60609 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.93■□□□□ 0.3
GFRA3O60609 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.93■□□□□ 0.3
GFRA3O60609 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.93■□□□□ 0.3
GFRA3O60609 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA3O60609 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.93■□□□□ 0.3
GFRA3O60609 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.92■□□□□ 0.3
GFRA3O60609 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GFRA3O60609 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GFRA3O60609 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.92■□□□□ 0.3
GFRA3O60609 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms