Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC138028.4-201ENST00000564984 1845 ntBASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC122714.2-201ENST00000502787 707 ntBASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC106795.1-205ENST00000512851 1056 ntBASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 TP73-AS1-207ENST00000624167 988 ntBASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC135050.7-201ENST00000624508 2218 ntBASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 COX5BP2-201ENST00000392354 334 ntBASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGHV4-28A0A0C4DH34 KRT18P55-202ENST00000578578 1546 ntBASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 AP005117.1-201ENST00000584346 1413 ntBASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms