Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 AC124864.1-201ENST00000623408 392 ntBASIC20.12■□□□□ 0.81
CLIC4Q9Y696 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 AC090340.1-201ENST00000620778 4980 ntBASIC20.12■□□□□ 0.81
CLIC4Q9Y696 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 AC007967.3-201ENST00000434308 558 ntBASIC20.11■□□□□ 0.81
CLIC4Q9Y696 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 KRT18P21-201ENST00000515767 1272 ntBASIC20.11■□□□□ 0.81
CLIC4Q9Y696 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 AL592071.1-201ENST00000611956 408 ntBASIC20.11■□□□□ 0.81
CLIC4Q9Y696 AL139327.4-201ENST00000612362 153 ntBASIC20.11■□□□□ 0.81
CLIC4Q9Y696 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC4Q9Y696 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 GUSBP12-201ENST00000513727 720 ntBASIC20.1■□□□□ 0.81
CLIC4Q9Y696 AC011498.5-201ENST00000592027 486 ntBASIC20.1■□□□□ 0.81
CLIC4Q9Y696 AC005336.2-201ENST00000593183 939 ntBASIC20.1■□□□□ 0.81
CLIC4Q9Y696 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC4Q9Y696 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AL031133.1-201ENST00000406807 723 ntBASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AL136038.3-201ENST00000561909 1096 ntBASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AL353801.3-201ENST00000609898 542 ntBASIC20.09■□□□□ 0.81
CLIC4Q9Y696 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms