Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Gm12896-201ENSMUST00000118430 226 ntBASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smco4Q9JIS3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Gm13186-201ENSMUST00000118031 316 ntBASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smco4Q9JIS3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms