Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx28Q9CWT6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Gm13418-201ENSMUST00000119097 944 ntBASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Gm11452-201ENSMUST00000122376 690 ntBASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ddx28Q9CWT6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx28Q9CWT6 Grk6-207ENSMUST00000225925 2769 ntBASIC13.77□□□□□ -0.2
Ddx28Q9CWT6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx28Q9CWT6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ddx28Q9CWT6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.77□□□□□ -0.2
Ddx28Q9CWT6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Efs-202ENSMUST00000227037 2540 ntBASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx28Q9CWT6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.76□□□□□ -0.21
Ddx28Q9CWT6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms