Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 AC074386.1-202ENST00000463561 864 ntBASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 AC109462.3-201ENST00000573934 613 ntBASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 GGTLC5P-201ENST00000617623 998 ntBASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SNRNP40Q96DI7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 AC097637.2-201ENST00000624096 1997 ntBASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 RHOQP3-201ENST00000437982 621 ntBASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 STK19B-204ENST00000512515 211 ntBASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 AC019129.2-201ENST00000609837 1235 ntBASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRNP40Q96DI7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 AL139400.1-201ENST00000366220 510 ntBASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 AP002414.1-201ENST00000391405 1147 ntBASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 SPCS2P1-201ENST00000561636 679 ntBASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 AC004449.1-201ENST00000564240 433 ntBASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 OR7E47P-204ENST00000575924 449 ntBASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 AC007064.4-201ENST00000637740 555 ntBASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms