Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.11■□□□□ 0.49
SCG3Q8WXD2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SCG3Q8WXD2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.11■□□□□ 0.49
SCG3Q8WXD2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCG3Q8WXD2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCG3Q8WXD2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG3Q8WXD2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCG3Q8WXD2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.1■□□□□ 0.49
SCG3Q8WXD2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 KRT18P55-202ENST00000578578 1546 ntBASIC18.09■□□□□ 0.49
SCG3Q8WXD2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 KRT18P1-202ENST00000452408 1331 ntBASIC18.09■□□□□ 0.49
SCG3Q8WXD2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 AP003733.1-201ENST00000491725 852 ntBASIC18.09■□□□□ 0.49
SCG3Q8WXD2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.09■□□□□ 0.49
SCG3Q8WXD2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCG3Q8WXD2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCG3Q8WXD2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCG3Q8WXD2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.08■□□□□ 0.49
SCG3Q8WXD2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCG3Q8WXD2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCG3Q8WXD2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.08■□□□□ 0.49
SCG3Q8WXD2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCG3Q8WXD2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms