Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 MIR3917-201ENST00000580971 93 ntBASIC16.56■□□□□ 0.24
CCDC71Q8IV32 RN7SL510P-201ENST00000581311 263 ntBASIC16.56■□□□□ 0.24
CCDC71Q8IV32 AP002414.4-201ENST00000589764 1148 ntBASIC16.56■□□□□ 0.24
CCDC71Q8IV32 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 AL391807.1-203ENST00000604392 2365 ntBASIC16.56■□□□□ 0.24
CCDC71Q8IV32 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 AL121761.2-201ENST00000598007 1648 ntBASIC16.56■□□□□ 0.24
CCDC71Q8IV32 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71Q8IV32 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 HLA-F-220ENST00000434407 884 ntBASIC16.55■□□□□ 0.24
CCDC71Q8IV32 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 KRT8P26-201ENST00000534154 1276 ntBASIC16.55■□□□□ 0.24
CCDC71Q8IV32 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC71Q8IV32 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 AL845331.1-201ENST00000424978 1190 ntBASIC16.54■□□□□ 0.24
CCDC71Q8IV32 AC246785.2-201ENST00000432512 513 ntBASIC16.54■□□□□ 0.24
CCDC71Q8IV32 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 UBALD1-205ENST00000590891 2641 ntBASIC16.54■□□□□ 0.24
CCDC71Q8IV32 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71Q8IV32 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms