Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 AL023806.1-201ENST00000603994 1649 ntBASIC17.36■□□□□ 0.37
SYVN1Q86TM6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 FAAHP1-202ENST00000446499 1238 ntBASIC17.36■□□□□ 0.37
SYVN1Q86TM6 AP003733.1-201ENST00000491725 852 ntBASIC17.36■□□□□ 0.37
SYVN1Q86TM6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 RNF126P1-202ENST00000569893 925 ntBASIC17.36■□□□□ 0.37
SYVN1Q86TM6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 AC024563.2-201ENST00000603282 481 ntBASIC17.36■□□□□ 0.37
SYVN1Q86TM6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYVN1Q86TM6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 TPSP2-201ENST00000561760 610 ntBASIC17.35■□□□□ 0.37
SYVN1Q86TM6 AC090616.6-201ENST00000582640 721 ntBASIC17.35■□□□□ 0.37
SYVN1Q86TM6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 KRT8P47-201ENST00000604727 1398 ntBASIC17.35■□□□□ 0.37
SYVN1Q86TM6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 AL138688.1-201ENST00000624851 1594 ntBASIC17.35■□□□□ 0.37
SYVN1Q86TM6 Z83836.1-201ENST00000624605 1642 ntBASIC17.35■□□□□ 0.37
SYVN1Q86TM6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYVN1Q86TM6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 LINC00265-3P-201ENST00000447588 903 ntBASIC17.34■□□□□ 0.37
SYVN1Q86TM6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 REXO1L11P-201ENST00000620964 1927 ntBASIC17.34■□□□□ 0.37
SYVN1Q86TM6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYVN1Q86TM6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYVN1Q86TM6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
SYVN1Q86TM6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.33■□□□□ 0.37
SYVN1Q86TM6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
SYVN1Q86TM6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms