Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 AP002472.1-201ENST00000577490 586 ntBASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM71Q2Q1W2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 AL590787.1-201ENST00000568856 1315 ntBASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM71Q2Q1W2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 AL020996.1-203ENST00000536896 2307 ntBASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 AL645939.2-201ENST00000427340 991 ntBASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 FAM58CP-201ENST00000435741 640 ntBASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 AC074386.1-202ENST00000463561 864 ntBASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 AP000997.3-201ENST00000623333 2250 ntBASIC19.11■□□□□ 0.65
TRIM71Q2Q1W2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 MYCLP1-201ENST00000372451 1075 ntBASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 ACTG1P4-201ENST00000425123 1122 ntBASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM71Q2Q1W2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms