Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC3A1Q07837 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC3A1Q07837 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC3A1Q07837 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC3A1Q07837 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC3A1Q07837 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC3A1Q07837 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC3A1Q07837 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.9■□□□□ 0.14
SLC3A1Q07837 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC3A1Q07837 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 MIR4674-201ENST00000582457 87 ntBASIC15.9■□□□□ 0.14
SLC3A1Q07837 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC3A1Q07837 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC3A1Q07837 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC3A1Q07837 AL121761.2-201ENST00000598007 1648 ntBASIC15.9■□□□□ 0.14
SLC3A1Q07837 AL356309.3-201ENST00000624132 1934 ntBASIC15.9■□□□□ 0.14
SLC3A1Q07837 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
SLC3A1Q07837 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 COX11P1-201ENST00000489116 835 ntBASIC15.89■□□□□ 0.13
SLC3A1Q07837 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 AC140113.3-201ENST00000605663 199 ntBASIC15.89■□□□□ 0.13
SLC3A1Q07837 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 AC010331.1-201ENST00000611423 582 ntBASIC15.89■□□□□ 0.13
SLC3A1Q07837 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 AC141257.4-201ENST00000634557 245 ntBASIC15.89■□□□□ 0.13
SLC3A1Q07837 AC136944.6-201ENST00000634818 245 ntBASIC15.89■□□□□ 0.13
SLC3A1Q07837 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC3A1Q07837 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.89■□□□□ 0.13
SLC3A1Q07837 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC3A1Q07837 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC3A1Q07837 AL024508.2-201ENST00000607749 1894 ntBASIC15.88■□□□□ 0.13
SLC3A1Q07837 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC3A1Q07837 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC3A1Q07837 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC3A1Q07837 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC3A1Q07837 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC3A1Q07837 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC3A1Q07837 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC3A1Q07837 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC3A1Q07837 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC3A1Q07837 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC3A1Q07837 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC3A1Q07837 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC3A1Q07837 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC3A1Q07837 HOXB1-202ENST00000577092 1414 ntBASIC15.88■□□□□ 0.13
SLC3A1Q07837 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC3A1Q07837 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC3A1Q07837 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC3A1Q07837 NFIC-211ENST00000641145 8399 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms