Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR4P51571 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR4P51571 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SSR4P51571 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR4P51571 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR4P51571 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SSR4P51571 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SSR4P51571 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SSR4P51571 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR4P51571 SIGLEC16-201ENST00000599858 1437 ntBASIC16.18■□□□□ 0.18
SSR4P51571 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.18■□□□□ 0.18
SSR4P51571 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SSR4P51571 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.18■□□□□ 0.18
SSR4P51571 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR4P51571 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR4P51571 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
SSR4P51571 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SSR4P51571 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR4P51571 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.18■□□□□ 0.18
SSR4P51571 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR4P51571 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.17■□□□□ 0.18
SSR4P51571 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.17■□□□□ 0.18
SSR4P51571 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.17■□□□□ 0.18
SSR4P51571 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SSR4P51571 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SSR4P51571 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.17■□□□□ 0.18
SSR4P51571 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.17■□□□□ 0.18
SSR4P51571 MYCLP1-201ENST00000372451 1075 ntBASIC16.17■□□□□ 0.18
SSR4P51571 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SSR4P51571 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 RPS2P1-201ENST00000434010 821 ntBASIC16.17■□□□□ 0.18
SSR4P51571 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 RNA5SP419-201ENST00000515908 135 ntBASIC16.17■□□□□ 0.18
SSR4P51571 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SSR4P51571 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.17■□□□□ 0.18
SSR4P51571 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.17■□□□□ 0.18
SSR4P51571 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.17■□□□□ 0.18
SSR4P51571 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.17■□□□□ 0.18
SSR4P51571 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.17■□□□□ 0.18
SSR4P51571 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SSR4P51571 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR4P51571 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR4P51571 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR4P51571 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SSR4P51571 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SSR4P51571 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR4P51571 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.16■□□□□ 0.18
SSR4P51571 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR4P51571 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.16■□□□□ 0.18
SSR4P51571 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
SSR4P51571 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.16■□□□□ 0.18
SSR4P51571 AL590627.1-203ENST00000421194 1026 ntBASIC16.16■□□□□ 0.18
SSR4P51571 HNRNPDP1-201ENST00000439535 754 ntBASIC16.16■□□□□ 0.18
SSR4P51571 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.16■□□□□ 0.18
SSR4P51571 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 STK19B-204ENST00000512515 211 ntBASIC16.16■□□□□ 0.18
SSR4P51571 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR4P51571 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SSR4P51571 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR4P51571 AC025062.2-201ENST00000605477 670 ntBASIC16.16■□□□□ 0.18
SSR4P51571 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SSR4P51571 FAM215A-202ENST00000632077 792 ntBASIC16.16■□□□□ 0.18
SSR4P51571 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.16■□□□□ 0.18
SSR4P51571 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.16■□□□□ 0.18
SSR4P51571 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR4P51571 AC132938.5-201ENST00000624980 1813 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms