Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPL35P42766 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.27□□□□□ -0.13
RPL35P42766 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPL35P42766 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
RPL35P42766 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.26□□□□□ -0.13
RPL35P42766 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.26□□□□□ -0.13
RPL35P42766 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RPL35P42766 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RPL35P42766 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.26□□□□□ -0.13
RPL35P42766 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.26□□□□□ -0.13
RPL35P42766 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.26□□□□□ -0.13
RPL35P42766 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.26□□□□□ -0.13
RPL35P42766 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.26□□□□□ -0.13
RPL35P42766 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RPL35P42766 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.26□□□□□ -0.13
RPL35P42766 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RPL35P42766 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.26□□□□□ -0.13
RPL35P42766 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.26□□□□□ -0.13
RPL35P42766 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.26□□□□□ -0.13
RPL35P42766 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.26□□□□□ -0.13
RPL35P42766 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35P42766 MTMR9LP-203ENST00000426597 1545 ntBASIC14.25□□□□□ -0.13
RPL35P42766 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.25□□□□□ -0.13
RPL35P42766 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RPL35P42766 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.25□□□□□ -0.13
RPL35P42766 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 BID-214ENST00000617586 542 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.25□□□□□ -0.13
RPL35P42766 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 PTENP1-202ENST00000532280 3996 ntBASIC14.25□□□□□ -0.13
RPL35P42766 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 FLJ13224-201ENST00000313737 1514 ntBASIC14.25□□□□□ -0.13
RPL35P42766 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL35P42766 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RPL35P42766 AC079781.5-202ENST00000641784 3743 ntBASIC14.25□□□□□ -0.13
RPL35P42766 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35P42766 AC124283.5-201ENST00000624661 1809 ntBASIC14.25□□□□□ -0.13
RPL35P42766 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
RPL35P42766 AC092384.3-202ENST00000564646 2873 ntBASIC14.24□□□□□ -0.13
RPL35P42766 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35P42766 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.24□□□□□ -0.13
RPL35P42766 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35P42766 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.24□□□□□ -0.13
RPL35P42766 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms