Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
PTP4A1Q93096 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 GCSHP2-201ENST00000560971 527 ntBASIC15.89■□□□□ 0.13
PTP4A1Q93096 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 AC018695.7-201ENST00000624587 2492 ntBASIC15.89■□□□□ 0.13
PTP4A1Q93096 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PTP4A1Q93096 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A1Q93096 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A1Q93096 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PTP4A1Q93096 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 AC079602.3-201ENST00000623931 403 ntBASIC15.87■□□□□ 0.13
PTP4A1Q93096 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.87■□□□□ 0.13
PTP4A1Q93096 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTP4A1Q93096 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms