Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 AC002056.1-201ENST00000395613 760 ntBASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC168Q8NDH2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 MYLKP1-201ENST00000509077 1580 ntBASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 ACTL9-202ENST00000612068 1252 ntBASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 FO538757.1-201ENST00000623083 1397 ntBASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 AC103564.2-201ENST00000432853 1299 ntBASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC168Q8NDH2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 AL135744.1-201ENST00000565098 629 ntBASIC14.65□□□□□ -0.06
CCDC168Q8NDH2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 AC092580.3-201ENST00000430932 139 ntBASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 AC097493.3-201ENST00000509725 367 ntBASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC168Q8NDH2 AC019129.2-201ENST00000609837 1235 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms