Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP1BQ7LBR1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 AC124864.1-201ENST00000623408 392 ntBASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP1BQ7LBR1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 TSPY12P-201ENST00000421279 868 ntBASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP1BQ7LBR1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 LINC00265-3P-201ENST00000447588 903 ntBASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CHMP1BQ7LBR1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms