Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Gm2810-201ENSMUST00000118681 990 ntBASIC14.05□□□□□ -0.16
Sema3bQ62177 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
Sema3bQ62177 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.05□□□□□ -0.16
Sema3bQ62177 Gm8318-201ENSMUST00000182954 872 ntBASIC14.05□□□□□ -0.16
Sema3bQ62177 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.05□□□□□ -0.16
Sema3bQ62177 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.05□□□□□ -0.16
Sema3bQ62177 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sema3bQ62177 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.05□□□□□ -0.16
Sema3bQ62177 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Sema3bQ62177 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sema3bQ62177 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sema3bQ62177 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.04□□□□□ -0.16
Sema3bQ62177 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Gm9824-201ENSMUST00000178707 561 ntBASIC14.04□□□□□ -0.16
Sema3bQ62177 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sema3bQ62177 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sema3bQ62177 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.04□□□□□ -0.16
Sema3bQ62177 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sema3bQ62177 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sema3bQ62177 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sema3bQ62177 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.03□□□□□ -0.16
Sema3bQ62177 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Gm38294-201ENSMUST00000192831 381 ntBASIC14.03□□□□□ -0.16
Sema3bQ62177 Gm7730-201ENSMUST00000212486 454 ntBASIC14.03□□□□□ -0.16
Sema3bQ62177 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sema3bQ62177 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.03□□□□□ -0.16
Sema3bQ62177 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.03□□□□□ -0.16
Sema3bQ62177 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sema3bQ62177 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sema3bQ62177 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sema3bQ62177 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sema3bQ62177 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sema3bQ62177 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sema3bQ62177 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sema3bQ62177 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Sema3bQ62177 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sema3bQ62177 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sema3bQ62177 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sema3bQ62177 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms