Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx1P63006 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx1P63006 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx1P63006 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx1P63006 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx1P63006 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx1P63006 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx1P63006 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx1P63006 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.47□□□□□ -0.09
Lhx1P63006 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx1P63006 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx1P63006 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.46□□□□□ -0.09
Lhx1P63006 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Lhx1P63006 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lhx1P63006 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Lhx1P63006 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Lhx1P63006 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.46□□□□□ -0.09
Lhx1P63006 Gm15693-201ENSMUST00000120470 637 ntBASIC14.46□□□□□ -0.09
Lhx1P63006 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Gm22175-201ENSMUST00000175007 78 ntBASIC14.46□□□□□ -0.09
Lhx1P63006 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Olfr286-202ENSMUST00000205305 969 ntBASIC14.46□□□□□ -0.09
Lhx1P63006 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.46□□□□□ -0.09
Lhx1P63006 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.46□□□□□ -0.09
Lhx1P63006 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lhx1P63006 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.46□□□□□ -0.09
Lhx1P63006 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.46□□□□□ -0.09
Lhx1P63006 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Lhx1P63006 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx1P63006 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lhx1P63006 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.46□□□□□ -0.1
Lhx1P63006 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Lhx1P63006 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lhx1P63006 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx1P63006 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx1P63006 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.45□□□□□ -0.1
Lhx1P63006 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.45□□□□□ -0.1
Lhx1P63006 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.45□□□□□ -0.1
Lhx1P63006 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx1P63006 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx1P63006 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lhx1P63006 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.45□□□□□ -0.1
Lhx1P63006 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lhx1P63006 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Lhx1P63006 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx1P63006 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Lhx1P63006 Gm5779-201ENSMUST00000218467 910 ntBASIC14.45□□□□□ -0.1
Lhx1P63006 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lhx1P63006 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx1P63006 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Lhx1P63006 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx1P63006 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Lhx1P63006 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.45□□□□□ -0.1
Lhx1P63006 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.44□□□□□ -0.1
Lhx1P63006 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lhx1P63006 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.44□□□□□ -0.1
Lhx1P63006 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Lhx1P63006 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Lhx1P63006 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.44□□□□□ -0.1
Lhx1P63006 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lhx1P63006 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx1P63006 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lhx1P63006 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx1P63006 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.43□□□□□ -0.1
Lhx1P63006 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx1P63006 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Lhx1P63006 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx1P63006 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx1P63006 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx1P63006 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx1P63006 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx1P63006 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx1P63006 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms