Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.91■□□□□ 0.14
HLA-DQA2P01906 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 AC141586.5-201ENST00000624546 2050 ntBASIC15.91■□□□□ 0.14
HLA-DQA2P01906 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DQA2P01906 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 AL138966.2-201ENST00000621997 464 ntBASIC15.9■□□□□ 0.14
HLA-DQA2P01906 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 AL031432.5-201ENST00000641059 760 ntBASIC15.9■□□□□ 0.14
HLA-DQA2P01906 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA2P01906 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
HLA-DQA2P01906 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
HLA-DQA2P01906 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 PP12613-201ENST00000424958 2230 ntBASIC15.89■□□□□ 0.13
HLA-DQA2P01906 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 RASA4DP-201ENST00000460726 1199 ntBASIC15.89■□□□□ 0.13
HLA-DQA2P01906 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA2P01906 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA2P01906 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA2P01906 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA2P01906 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms