Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.44□□□□□ -0.74
Sh2d1aO88890 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Gm10060-201ENSMUST00000212002 111 ntBASIC10.44□□□□□ -0.74
Sh2d1aO88890 Gm7787-201ENSMUST00000216858 688 ntBASIC10.44□□□□□ -0.74
Sh2d1aO88890 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.44□□□□□ -0.74
Sh2d1aO88890 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.44□□□□□ -0.74
Sh2d1aO88890 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sh2d1aO88890 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.43□□□□□ -0.74
Sh2d1aO88890 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.43□□□□□ -0.74
Sh2d1aO88890 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.43□□□□□ -0.74
Sh2d1aO88890 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms