Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 ANKRD26P3-201ENST00000454044 2748 ntBASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 AL645929.1-201ENST00000420084 975 ntBASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 AC087272.1-201ENST00000523624 533 ntBASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 CR769767.2-201ENST00000622735 460 ntBASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.04■□□□□ 0.8
SPDYE4A6NLX3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 AC092119.3-201ENST00000612618 583 ntBASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 AC073575.2-201ENST00000614212 627 ntBASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDYE4A6NLX3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 AC008741.2-201ENST00000612792 3115 ntBASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 NPM1P28-201ENST00000492269 840 ntBASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 MIR4674-201ENST00000582457 87 ntBASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 AL355816.2-201ENST00000610049 647 ntBASIC20.02■□□□□ 0.8
SPDYE4A6NLX3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms